FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1698932
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAT8550.0081340647.62521841
CTAAAGA10507.75102E-47.5889081
CAGTCCA11200.00154845117.11062154
CTCCGAA15701.8077821E-46.459581
CATTAAT14850.00446516285.8537031
CTTGGAA19350.00260528395.2411061
CTCCGGA20100.00418723145.04554271
Produced by FastQC (version 0.11.5)