FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences842142
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGACGA7100.001679579.080654
CTTGAAT6500.00797111458.8646651
GTTTGAA11151.8364213E-47.7516121
GTTCAAT9800.0035005747.34953071
AAAGGTT10250.0057126946.9889014
CTTTGAT13700.0019291986.3087941
GGCAAAG15850.0097590375.45302721
TCCAGAT19400.00308469735.16993243
Produced by FastQC (version 0.11.5)