FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1170103
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAG7550.00264803588.6373241
CCCAAAG9452.491217E-48.4342131
CTTTCGT10900.0092781936.64748241
CTTCTCT13550.00159458926.4169051
CAACAAT15007.271916E-46.27965451
CTTTGAT18854.5471585E-56.15024331
CTTCCAA15600.00767781635.5736581
CTTTTCT27502.1554024E-65.5331221
CTTCCGG25008.499441E-55.21694371
TCAATGC18450.0089996325.080543
Produced by FastQC (version 0.11.5)