FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1195164
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGGGC400.006138138554.1792143
GTCGACT1950.006990269818.5204838
TGGAACG11900.0030051686.67671257
CTTCGAT12850.0065774696.19398741
CTCAAAA14750.00419184155.88667441
AGATTCT15800.0091373295.48627334
CTTCGGC21302.6990275E-45.43527031
CTTTTAT22355.3406006E-45.1799221
CTTTCTT31504.868769E-65.05350731
Produced by FastQC (version 0.11.5)