FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1090638
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACAGC5150.001157285311.191382
ATTTACG8650.00102681358.325796
CCGATTC9803.9286347E-48.0851463
TCGCGGT8050.0049740368.0546662
CTACAAT9000.00147911428.0240821
GATTTGC13552.8220526E-57.4409835
CAACGAA11350.00182901566.9989791
CAAACAT10850.0091643146.65592051
CTTTAAT12250.00407808746.48476841
CTTTCAC13700.00187390676.3255541
GTTTTAT15600.00121387496.0180621
TGGATTT18100.0072825125.17351873
Produced by FastQC (version 0.11.5)