FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences664218
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACATAA5900.0035235049.7881031
TCACGGA6450.0075124218.9284842
CCTCGAC7800.00367322548.3292991
CTTGAAA10700.0080344516.74647241
ATCAAAA12900.00700552166.15550231
Produced by FastQC (version 0.11.5)