FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1682013
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT7451.9836698E-611.3738849
ACACGTC7051.6176829E-410.0160088
CACACGT7202.0002053E-49.8073427
AGAGCAC11904.8897276E-47.1206243
CTTCAAT22102.5619938E-66.1023541
TGCGCCT16050.00223289135.7194229
AAGAGCA20502.2137699E-45.51173932
Produced by FastQC (version 0.11.5)