FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences697129
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGTACT1300.00472064630.532185145
CACCAAT6608.311533E-49.8066661
CTTCAAA11703.747858E-57.99061731
TTTCAGT10550.0075648886.78877166
TTTAAAT11700.0027447496.73364937
TTTGTCA10850.0099143376.60106338
Produced by FastQC (version 0.11.5)