FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1275412
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCCT7400.00218333148.823161
ACGATGT11853.5865043E-47.31531143
CTCAAAT11953.761964E-47.2849521
CAAAGAA34952.2447057E-75.1892691
GAAATAC22907.739709E-45.04526665
Produced by FastQC (version 0.11.5)