FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences479665
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1450.001301801624.7423047
ACACGTC1900.006246340518.8822848
GCACACG2500.00149200317.2206446
CTTACGG3250.00833326713.2979391
CAAAAGG6200.00539673079.2942581
Produced by FastQC (version 0.11.5)