FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013949

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013949
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1436097
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGCT8650.00110757698.26277351
CAAAAAT28056.744376E-75.60572431
CTTTTAT22758.154257E-45.0266721
Produced by FastQC (version 0.11.5)