FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2482211
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT8751.4337493E-59.6381657
CACGTCT9152.4324527E-59.2168259
ACACGTC10800.00144401697.15797478
AGAGCAC12609.886904E-46.69451863
AGCACAC11750.0035046556.5801725
ATCTACG12950.0096323545.97042666
GCACACG14200.00379697445.9398486
CCCAAAT17750.00127852385.54620461
CTTTGAC23655.692911E-55.3518951
Produced by FastQC (version 0.11.5)