FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1232980
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT4152.0767575E-413.7239167
CACGTCT5500.002211067110.3553199
AGCACAC8055.2653602E-59.7286055
GGCACAT9101.8638108E-59.4259051
ACACGTC6200.0059531619.1861698
CGTCAAG14750.0048009535.81530481
Produced by FastQC (version 0.11.5)