FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1573364
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGACA6550.0089477548.74130253
CTCTTAC8000.0047603238.0945251
CTTTAAC11753.9396215E-57.96057371
TAAAGCC14053.8204627E-46.62208133
CCTGTAC13100.00117905696.5909621
GTTGTAT14400.00341681095.99594451
GTTCATA14450.00355155585.9751981
CTTTGAT23754.2227468E-55.45315361
CAATATT26153.7737715E-55.20007234
Produced by FastQC (version 0.11.5)