FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences877504
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAT1950.00691042418.556721
GTTCAGT5600.00223957510.3387441
CTTCAAT11753.926176E-68.62295151
CCCGCAC8100.0050471628.04124451
CATGGAT10100.0044831067.1654661
CTTGAAA14950.0048541595.809061
Produced by FastQC (version 0.11.5)