FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013972

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013972
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences551611
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCCCC3456.9975364E-414.7084441
CCAGATT6350.00623600059.1328021
CTCAAAA7450.00233243038.7573771
CTCCTTT8250.0058564327.90817641
CTTTATT11500.00201381936.9339811
Produced by FastQC (version 0.11.5)