FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences594095
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCATAT5551.6310738E-411.6958251
TTACGGA7301.9048656E-49.852598
TCCTTTA7803.696586E-49.2233432
CTTCATT10206.413711E-69.19230651
GGAATAT11600.00239127536.8220933
CTTTCCG10850.0092636026.6473961
CAAAAAT13000.0076549266.1028211
Produced by FastQC (version 0.11.5)