FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences857209
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTGACT4000.002578424512.3738341
CTGGAAT8450.0090802457.5309891
TTCAATA15201.6888406E-46.4923942
CAAGAAT12200.00486838726.3752771
CTTTGAA13500.0020126666.28512141
TTCCAAT15350.0087753565.5060299
Produced by FastQC (version 0.11.5)