FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1477278
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGTA5850.0031451389.9248761
CTCCTAT8550.0079974877.63954261
CCACAAC10900.00113112967.32414771
TCCTATT12000.00324756336.6277662
CCTTGAA18553.5170044E-56.25989441
CCTCTGT12800.0061240056.236971
ATTTTCG18903.216292E-45.73696576
CCCAAAA15850.0089884865.4946861
ACAAGAT17200.00384114945.46345958
CCAAAAT18700.00165562935.4334711
Produced by FastQC (version 0.11.5)