FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1118765
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC2500.00504679376.3547597100-104
CCTCCGG12750.00631323646.2184121
CTTTTAT20051.8352492E-56.11127041
CTTTCAT20359.042317E-45.31280471
Produced by FastQC (version 0.11.5)