Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005013994 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1662576 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCAACCT | 940 | 2.5530278E-5 | 9.178609 | 1 |
CGCATAT | 1090 | 1.5504127E-5 | 8.575123 | 1 |
CTTAAAT | 1255 | 9.019666E-5 | 7.447716 | 1 |
CCCGCGA | 1020 | 0.0052639283 | 7.0489326 | 1 |
CTTTAAT | 1910 | 6.170674E-5 | 6.0229616 | 1 |
CACATTT | 1615 | 0.0019390474 | 5.7875443 | 1 |