FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences408346
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATTAC3150.00714717813.6096464
CATCGAA3300.009516871513.0325261
CGTATTT4750.00858007210.5295693
CAAAAAA10307.031525E-47.65502741
Produced by FastQC (version 0.11.5)