FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1220569
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTCT5700.002899974810.0223331
CTTCAGA8850.00140041248.0688271
GTTTAAT8250.00671425047.79008631
CCTTAAA9550.002959767.47739461
ATTGAGG9700.00347460257.3557336
TTCAGAC9950.00444952777.17150352
CGTCGAT14450.00386212465.9301691
Produced by FastQC (version 0.11.5)