FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1945568
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGCT7301.5674499E-510.8603271
GCACTAC7050.0035275179.788329145
CTCATGT9151.8628984E-48.6645221
CTCTGAT11500.00214758966.8939461
CTCCAAT16103.6995876E-56.71488241
CTCTTAT15501.6350893E-46.50982571
CTCGAAA15752.0127128E-46.4064951
CTGACAT13300.0097892555.9609311
CTTGAAT20001.16007825E-45.76584531
CTTTCAT35155.2399628E-85.33115151
CTTTTAT43151.4042598E-95.1779031
Produced by FastQC (version 0.11.5)