FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences785698
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAACCC3250.008246213.3206074
CAACGTT5059.693067E-411.4302242
CTCTGAT6100.00419688139.5834961
CAATCTG12055.1981347E-57.78417254
CTCAAAA10200.00448986477.1641331
ATTGGAT12656.632832E-46.93193631
ATATTGG15057.960235E-46.23211346
GCTCTCG2850.0029101586.083268100-104
CTGGAAA15200.00523940475.7690131
CTTTCAA20206.801015E-45.42629861
Produced by FastQC (version 0.11.5)