FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences789244
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGTGC3050.00584291114.0323774
GACCCTG3150.007243671513.5843238
CCTGCAC9904.792586E-47.9362561
CAAAACG9650.00326637237.4016891
ATTTTGT13950.00259546176.1441981
CAAGGAA15350.0075168265.5838151
Produced by FastQC (version 0.11.5)