FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3703969
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACGAG12750.00741986336.1232235
CTCTCGT15350.00778397035.56752541
GTCGGAT23053.0938092E-55.56148671
GGTACGC20450.00118991055.20561467
CTCCCGA22155.89998E-45.144411
TTGTACA27601.9345343E-55.1426769
CTTAATT26454.954276E-55.11584331
CTCGGCT25101.1910164E-45.1072611
Produced by FastQC (version 0.11.5)