FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014029

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014029
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences669742
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAT4650.00622059510.9971671
CTTCAGA7351.4517873E-510.9330421
CTTCCAT8608.172123E-59.3439381
CTCCGAC7500.002312258.7663131
CGATTCC7550.0027255258.6087836
TTGAACT8400.0071149477.7388113
CTTCAAC9550.00236470797.6494871
GATTTCC11850.0028755046.70379165
CTTTCAT10950.008949626.67147061
Produced by FastQC (version 0.11.5)