FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences888384
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGCAT7200.0017551879.0369371
CCTCGTT6600.0090405838.7295262
TCGAGCA7500.00264529658.6378523
AAGGATT13050.00112203076.6190444
CAAAAAT19153.8287832E-45.66283231
Produced by FastQC (version 0.11.5)