FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences843569
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAG3555.180217E-516.1524541
TCCAAGT6200.00572189189.229912
TTTAAGA8055.3710944E-48.8859372
CAAATTT10005.3532486E-47.85497143
AAAACCT9750.003625897.32311447
ATTTTAA12350.00479813676.38414341
CTTCAAG16000.00179672525.82371661
CTTTTTT27252.218274E-65.5236951
GATATTC17550.00561223925.2895435
Produced by FastQC (version 0.11.5)