FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences861366
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTAT5005.3352287E-613.9806911
CGTTAAT4605.778189E-412.1571221
CGGGAGG4650.00887377910.4840069
CCCGGCT7905.6021544E-48.8485391
CTCTTTA8850.0017266657.89869551
CTTGTAT8000.0061644937.8641391
CTCAAAA11900.00423051566.4616641
AAGATTT19206.5630965E-45.44091843
Produced by FastQC (version 0.11.5)