FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1048456
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACCAT6050.0043409019.5449681
CTCCAAT8050.00488801258.070241
GTTCATG10800.0090083446.66773462
CCTTTAT14655.718427E-46.405391
GTTTCCT14250.00292928266.0786371
CTCTTTT22451.0046318E-45.46603441
Produced by FastQC (version 0.11.5)