FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences578698
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCACTC2700.00353619615.1334855
ATTTGAC4500.008210733510.5934396
ATTGCAA6400.0010325069.5766585
CTTACAC2400.0060775596.24202355-59
Produced by FastQC (version 0.11.5)