FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences880083
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTTAA3800.001489621513.3106581
CCAGGTT5350.00158117110.7803482
GCCAGGT5950.00374978439.71534251
GCAAATC10400.00618398756.9320752
CAAAAAG20701.8273757E-45.5851491
Produced by FastQC (version 0.11.5)