FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1556996
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAGT4150.00301546112.1190581
CCTATCT9151.9262495E-48.6375481
CCCAAAA16601.0124149E-67.3579991
CTCTTCT15251.8104905E-57.0670851
GGTAGAG10350.006105876.9419031
CCCAAAG14557.451571E-56.9132761
CCACAAG10700.0084224276.71483141
CCTCAAG13150.0012510576.55653521
CTTTGAT23901.8516039E-76.3130651
CTTAAAT14907.432538E-46.2686781
CTCATAT14600.00404860825.9053721
CTCCATT16450.0024340695.67801241
CATAAAT24851.5134308E-55.49346161
CCAAAGC21904.7757782E-45.2214052
TTAACAA18350.0093725495.0631278
Produced by FastQC (version 0.11.5)