FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529589
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAT1357.7113346E-427.0659161
CTTCAAT8406.287231E-59.5697361
AATTTAA8307.120606E-48.6366315
CTTTCAT8608.367944E-48.4974391
CTTTAAT7900.0036863018.3253391
CAAAAAC9500.00223631137.6924181
Produced by FastQC (version 0.11.5)