FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences766647
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTCGG4755.823643E-412.1454781
CTCAAAT6300.00610473579.1573061
CTTTAAA8458.027766E-48.5341751
AATTTCA13250.0098222715.9579095
CTTTTTT23702.2939316E-45.1727181
Produced by FastQC (version 0.11.5)