FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1280976
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAGG2950.00437978614.6562631
ATCACGA9603.134072E-48.2568691
CCCCCTA1800.0099278467.4574804135-139
CTTATCT12808.907549E-46.75562141
CTTTTTA21256.9001126E-66.10390231
CTTCAAT18652.7996005E-45.7957071
CTTTGAT18500.00158108915.4531861
GATATTG26303.928705E-55.1871575
Produced by FastQC (version 0.11.5)