FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1320285
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGGA10050.0043249877.1925361
CTTCGGA16605.4253007E-56.53177641
TCAAACA14900.0048657115.80837352
CTTTTGG16350.00210560235.74743031
CTTTCAT22802.0427022E-55.70670941
ATTTTGG16600.00260888325.6447936
CTTTTGA20559.921185E-45.27627661
Produced by FastQC (version 0.11.5)