FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1207611
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT5900.00465099849.4656789
GAGCACA8500.0011752178.2132074
AGAGCAC8300.008676077.57000453
CTCGAAA9850.00472096877.1279741
CTTCAAA18202.8595809E-45.7865831
GGAAAAT24952.375478E-55.3466951
CAGAAAT19100.00327021355.14632271
Produced by FastQC (version 0.11.5)