FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences743372
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAACTT5400.00178248710.6260043
CTTCGTT7552.2500451E-510.5087611
TGCAAAC7800.0038627378.2832672
TTTACGA8150.00579326557.918488
CTTTTCT15151.9089475E-67.61751131
CTCCTCC8650.0098686627.4607649
CAAAAAC15500.00751046745.5841281
Produced by FastQC (version 0.11.5)