FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432095
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCT1550.00193657623.1099011
GACAGCC4050.00263850312.3336229
CTTCAGG4655.1381165E-412.3252821
CCTGAAC4655.3115946E-412.2767866
Produced by FastQC (version 0.11.5)