FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014143

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014143
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences418289
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACCCA753.0212377E-546.960119
CCTTGGG1902.579133E-422.3484571
TCGACTT2950.0050818514.32852653
GTTTCAT6653.2461685E-813.834761
GCGCTTC4600.007516592710.7191568
Produced by FastQC (version 0.11.5)