FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences976227
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAACT8407.3523395E-48.6105021
CCCATTT7850.0038266588.2924071
GATCCAG8050.0050412698.04247955
CAAATTT10950.00123024937.2658481
GTTCTTT18605.433303E-66.61064341
TTTGATA14856.9982954E-46.2993212
Produced by FastQC (version 0.11.5)