FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences570282
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAAT2709.6452866E-519.070951
CTCTTAT4450.004256183711.5711371
CATCCAT7400.00192125328.9464111
ATCAAGA7800.0036724628.3290922
CTTTCAT10500.0055745287.00565531
AATTTTC12150.0037524556.53530935
Produced by FastQC (version 0.11.5)