FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014155

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014155
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences756717
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGGCT400.006598429853.195831
CGATTCG5900.0041414459.5988874
CTTCGAT9102.0837158E-48.5736881
CTTCGGA7900.00482995768.08037951
CTTGACA8050.00571956257.9298131
CTTTTTA12055.3516554E-47.06334641
GATATTG12250.00502288166.35597375
GTCGGCA14250.0035602485.9728651
CAAAGAA16650.0032666455.5379041
Produced by FastQC (version 0.11.5)