FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458806
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGGAT3305.460276E-415.1964131
CCTTATT5500.002094515410.4203981
CATCAGG4800.00948611710.3883295
GGTAAAC4850.00982045710.33982851
Produced by FastQC (version 0.11.5)