FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences719462
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGTT5600.00272196810.0981571
AGTTGAT5700.00330662829.8637664
GTTCAAA7950.0052698748.0023141
CATACAG8150.00658635057.80593821
Produced by FastQC (version 0.11.5)