FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2102498
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGAT12406.254315E-46.9691751
CGTCAGA12657.8524713E-46.83144431
GTCCGAT12950.00102493986.67318631
CTCCAAT16655.964587E-56.487821
GAGATAG16704.475344E-46.02195075
CTGGTAC14400.00338487686.00123361
CAACGAA16955.242632E-45.9481261
CAACCAT19204.1919103E-45.6261571
GTTCCAT27702.76432E-65.4596061
TTCGATT18500.00163816335.4383592
CTTTGAC21904.2908208E-45.26135541
GTTTAAT19400.00289745445.19694471
ATTTAAG22456.3113164E-45.119526
CTCAAAT18400.0088573035.08800271
ACCGATT18500.009666865.0499052
GTCAAAG24403.6249997E-45.0174251
Produced by FastQC (version 0.11.5)