FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1597011
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCTGG7250.0017992479.0132571
CTTCTGA16002.2423948E-46.35309461
CACAGAT16400.00207192155.75541641
CTTAAAA19655.1280664E-45.54250341
CCTGCAT23451.7743549E-45.26360561
Produced by FastQC (version 0.11.5)